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Logiciels

Tools for DNA metabarcoding data analysis

Analyzing NGS data in a DNA metabarcoding context DNA metabarcoding relies heavily on the use of next-generation sequencing (NGS), and thus calls upon the ability to deal with huge sequence datasets. The OBITools package satisfies this requirement thanks to a set of programs specifically designed for analyzing NGS data in a DNA metabarcoding context. Their capacity to filter and edit (...)

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The BIOMOD package

BIOMOD is a computer platform for ensemble forecasting of species distributions, enabling the treatment of a range of methodological uncertainties in models and the examination of species-environment relationships. BIOMOD includes the ability to model species distributions with several techniques, test models with a wide range of approaches, project species distributions into different (...)

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Population Genomics Software

ABC4F BayeScan BIMr COLONISE GENBMAP GESTE ISIF PARENTE ScanAFLP WOMBSOFT ABC4F : Approximate Bayesian Computation for F-statistics A free software that estimates F-statistics using dominant data. The method implemented in ABC4F corrects for the ascertainment biases that characterise AFLP markers. This program is distributed under the terms of the GNU General Public Licence (GPL). (...)

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